seqJobs.cpp

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//
//  seqJobs.cpp
//Copyright (c) 2007-2012 Paul C Lott 
//University of California, Davis
//Genome and Biomedical Sciences Facility
//UC Davis Genome Center
//Ian Korf Lab
//Website: www.korflab.ucdavis.edu
//Email: lottpaul@gmail.com
//
//Permission is hereby granted, free of charge, to any person obtaining a copy of
//this software and associated documentation files (the "Software"), to deal in
//the Software without restriction, including without limitation the rights to
//use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of
//the Software, and to permit persons to whom the Software is furnished to do so,
//subject to the following conditions:
//
//The above copyright notice and this permission notice shall be included in all
//copies or substantial portions of the Software.
//
//THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
//IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS
//FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR
//COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER
//IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN
//CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.

#include "seqTracks.h"

namespace StochHMM{
    
    //!Create a seqJob
    seqJob::seqJob(size_t sz){
        decodingPerformed=false;
        attrib=-INFINITY;
        hmm=NULL;
        set=new sequences(sz);
        path=NULL;
    }
    
    //!Destroy a seqJob
    seqJob::~seqJob(){
        hmm=NULL;
        delete path;
        delete set;
        path=NULL;
        set=NULL;
    }

}