traceback_path.h File Reference

#include <vector>
#include <string>
#include <iostream>
#include <math.h>
#include <fstream>
#include <algorithm>
#include <sstream>
#include <stdint.h>
#include <stdlib.h>
#include "text.h"
#include "options.h"
#include "hmm.h"
#include "stochMath.h"

Go to the source code of this file.

Classes
struct	StochHMM::gff_feature
class	StochHMM::traceback_path
class	StochHMM::multiTraceback

Namespaces
namespace	StochHMM
	traceback_path.h

Typedefs
typedef std::vector < std::vector< int > >	StochHMM::heatTable

Functions
bool	StochHMM::sortTBVec (std::map< traceback_path, int >::iterator lhs, std::map< traceback_path, int >::iterator rhs)