userFunctions.h File Reference

#include <iostream>
#include <map>
#include <string>
#include <vector>
#include "PDF.h"

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Classes
class	StochHMM::StateFuncs
	(**Adding in log space) More...
class	StochHMM::TrackFuncs
	Stores pointer to user functions used to create Real Number Tracks. More...

Namespaces
namespace	StochHMM
	traceback_path.h

Typedefs
typedef double(*	StochHMM::transitionFunc )(const std::string *, const size_t, const std::string *, const size_t)
typedef double(*	StochHMM::emissionFunc )(const std::string *, const size_t)
	Pointer to emmission function Passed a string and position as size_t.
typedef double(*	StochHMM::pdfFunc )(const double, const std::vector< double > *)
	Pointer to Univariate Continuous Probability Density Function.
typedef double(*	StochHMM::multiPdfFunc )(const std::vector< double > *, const std::vector< double > *)
typedef std::vector< double > *(*	StochHMM::pt2TrackFunc )(const std::string *)
typedef double(*	StochHMM::pt2Attrib )(const std::string *)