StochHMM::seqTracks Member List

This is the complete list of members for StochHMM::seqTracks, including all inherited members.

_close()	StochHMM::seqTracks	private
_init()	StochHMM::seqTracks	private
_initImportTrackInfo(void)	StochHMM::seqTracks	private
_loadFASTA(std::string &, SeqFilesType)	StochHMM::seqTracks	private
_loadFASTA(std::vector< std::string > &, SeqFilesType)	StochHMM::seqTracks	private
_loadFASTQ(std::string &, SeqFilesType)	StochHMM::seqTracks	private
_loadFASTQ(std::vector< std::string > &, SeqFilesType)	StochHMM::seqTracks	private
_open()	StochHMM::seqTracks	private
_reset()	StochHMM::seqTracks	private
attribModelFunc	StochHMM::seqTracks	private
exit_thread	StochHMM::seqTracks	private
filehandles	StochHMM::seqTracks	private
fileType	StochHMM::seqTracks	private
getExDef(int, int)	StochHMM::seqTracks	private
getFasta(int)	StochHMM::seqTracks
getFastq(int)	StochHMM::seqTracks
getInformation()	StochHMM::seqTracks
getJob()	StochHMM::seqTracks
getNext()	StochHMM::seqTracks
getReal(int)	StochHMM::seqTracks
getTrackCount()	StochHMM::seqTracks	inline
good	StochHMM::seqTracks	private
hmm	StochHMM::seqTracks	private
hmms	StochHMM::seqTracks	private
importJobs()	StochHMM::seqTracks
importTracks	StochHMM::seqTracks	private
info	StochHMM::seqTracks	private
input	StochHMM::seqTracks	private
jobQueue	StochHMM::seqTracks	private
jobs	StochHMM::seqTracks	private
loadSeqs(model &, std::string &)	StochHMM::seqTracks
loadSeqs(model &, std::string &, SeqFileFormat)	StochHMM::seqTracks
loadSeqs(model &, std::string &, SeqFileFormat, TrackFuncs *)	StochHMM::seqTracks
loadSeqs(model &, std::vector< std::string > &, SeqFileFormat, SeqFilesType)	StochHMM::seqTracks
loadSeqs(model &, std::vector< std::string > &, SeqFileFormat, SeqFilesType, TrackFuncs *)	StochHMM::seqTracks
loadSeqs(models &, std::string &, SeqFileFormat, pt2Attrib *, TrackFuncs *)	StochHMM::seqTracks
loadSeqs(models &, std::string &, SeqFileFormat)	StochHMM::seqTracks
loadSeqs(models &, std::vector< std::string > &, SeqFileFormat, SeqFilesType, pt2Attrib *, TrackFuncs *)	StochHMM::seqTracks
loadSeqs(models &, std::vector< std::string > &, SeqFileFormat, SeqFilesType)	StochHMM::seqTracks
loadSeqs(models &, std::vector< std::string > &, SeqFileFormat, SeqFilesType, pt2Attrib *)	StochHMM::seqTracks
modelTracks	StochHMM::seqTracks	private
numImportJobs	StochHMM::seqTracks	private
postprocessTracks	StochHMM::seqTracks	private
print()	StochHMM::seqTracks
remainingSeqs()	StochHMM::seqTracks	inline
seqFilenames	StochHMM::seqTracks	private
seqFormat	StochHMM::seqTracks	private
seqTracks()	StochHMM::seqTracks
seqTracks(model &, std::string &)	StochHMM::seqTracks
seqTracks(model &, std::string &, SeqFileFormat)	StochHMM::seqTracks
seqTracks(model &, std::string &, SeqFileFormat, TrackFuncs *)	StochHMM::seqTracks
seqTracks(model &, std::vector< std::string > &, SeqFileFormat, SeqFilesType)	StochHMM::seqTracks
seqTracks(model &, std::vector< std::string > &, SeqFileFormat, SeqFilesType, TrackFuncs *)	StochHMM::seqTracks
seqTracks(models &, std::string &, SeqFileFormat, pt2Attrib *)	StochHMM::seqTracks
seqTracks(models &, std::string &, SeqFileFormat, pt2Attrib *, TrackFuncs *)	StochHMM::seqTracks
seqTracks(models &, std::vector< std::string > &, SeqFileFormat, SeqFilesType, pt2Attrib *)	StochHMM::seqTracks
seqTracks(models &, std::vector< std::string > &, SeqFileFormat, SeqFilesType, pt2Attrib *, TrackFuncs *)	StochHMM::seqTracks
setAttribFunc(pt2Attrib *func)	StochHMM::seqTracks	inline
setNumImportJobs(size_t value)	StochHMM::seqTracks	inline
setTrackFilename(std::string &, std::string &)	StochHMM::seqTracks
setTrackFunc(TrackFuncs *func)	StochHMM::seqTracks	inline
size(void)	StochHMM::seqTracks	inline
trackCount	StochHMM::seqTracks	private
trackFunctions	StochHMM::seqTracks	private
TrackToUseForAttrib	StochHMM::seqTracks	private
~seqTracks()	StochHMM::seqTracks