StochHMM
v0.34
Flexible Hidden Markov Model C++ Library and Application
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A
emm
(
StochHMM
)
N
sequence
(
StochHMM
)
track
(
StochHMM
)
ExDef
(
StochHMM
)
sequences
(
StochHMM
)
TrackFuncs
(
StochHMM
)
alignment
(
StochHMM
)
ExDefSequence
(
StochHMM
)
nthScore
(
StochHMM
)
sequenceStream
(
StochHMM
)
tracks
(
StochHMM
)
alt_simple_stochTable
(
StochHMM
)
G
nthTrace
(
StochHMM
)
simpleTable
(
StochHMM
)
trainingEmission
ambigCharacter
(
StochHMM
)
O
sparseArray
(
StochHMM
)
trainingSeq
B
gff_feature
(
StochHMM
)
state
(
StochHMM
)
trainingSeqs
I
opt_data
(
StochHMM
)
StateFuncs
(
StochHMM
)
transition
(
StochHMM
)
dynamic_bitset::bit_ref
(
StochHMM
)
opt_parameters
(
StochHMM
)
stateInfo
transitionFuncParam
(
StochHMM
)
C
Index
(
StochHMM
)
options
(
StochHMM
)
stateInfo
(
StochHMM
)
Trellis
L
P
stencil
(
StochHMM
)
trellis
(
StochHMM
)
cell
(
StochHMM
)
alt_simple_stochTable::stoch_val
(
StochHMM
)
W
Counter
(
StochHMM
)
lexicalTable
(
StochHMM
)
ppTrack
(
StochHMM
)
stochTable::stoch_value
(
StochHMM
)
D
M
PWM
(
StochHMM
)
stochTable
(
StochHMM
)
weight
(
StochHMM
)
S
stringList
(
StochHMM
)
weightDef
(
StochHMM
)
dynamic_bitset
(
StochHMM
)
matrixPosition
(
StochHMM
)
T
weights
(
StochHMM
)
E
model
(
StochHMM
)
seqJob
(
StochHMM
)
models
(
StochHMM
)
SeqTracks
templates
(
StochHMM
)
emissionFuncParam
(
StochHMM
)
multiTraceback
(
StochHMM
)
seqTracks
(
StochHMM
)
traceback_path
(
StochHMM
)
A
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B
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C
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D
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E
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G
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I
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L
|
M
|
N
|
O
|
P
|
S
|
T
|
W
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