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StochHMM
v0.34
Flexible Hidden Markov Model C++ Library and Application
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All Classes Namespaces Files Functions Variables Typedefs Enumerations Enumerator Friends Macros Groups Pages
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StochHMM
v0.34
Flexible Hidden Markov Model C++ Library and Application
|
#include <vector>#include <math.h>#include <iostream>Go to the source code of this file.
Namespaces | |
| namespace | StochHMM |
| traceback_path.h | |
Macros | |
| #define | PI 3.145926535897932 |
Functions | |
| float | StochHMM::discrete_uniform_cdf (int a, int b, int position) |
| double | StochHMM::binomial_cdf (double) |
| double | StochHMM::hypergeometric_cdf (double) |
| double | StochHMM::poisson_binomial_cdf (double) |
| double | StochHMM::degenerate_distribution (double) |
| double | StochHMM::beta_binomial_cdf (double) |
| double | StochHMM::boltzman_cdf (double) |
| double | StochHMM::extended_negative_binomial_cdf (double) |
| double | StochHMM::geometric_cdf (double) |
| double | StochHMM::logarithmic_cdf (double) |
| double | StochHMM::negative_binomial_cdf (double) |
| double | StochHMM::parabolic_fractal_cdf (double) |
| double | StochHMM::poisson_cdf (double) |
| double | StochHMM::skellam_cdf (double) |
| double | StochHMM::yule_simon_cdf (double) |
| double | StochHMM::zeta (double) |
| float | StochHMM::continuous_uniform_cdf (float, float, float) |
| double | StochHMM::beta_prime_cdf (double) |
| double | StochHMM::chi_cdf (double) |
| double | StochHMM::noncentral_chi_cdf (double) |
| double | StochHMM::chi_square_cdf (double) |
| double | StochHMM::exponential_cdf (double) |
| double | StochHMM::F_cdf (double) |
| double | StochHMM::gamma_cdf (double) |
| double | StochHMM::fisher_z_cdf (double) |
| double | StochHMM::folded_normal_distribution (double) |
| double | StochHMM::half_normal_distribution (double) |
| double | StochHMM::hotelling_t_square_cdf (double) |
| double | StochHMM::inverse_gaussian_cdf (double) |
| double | StochHMM::log_logistic_cdf (double) |
| double | StochHMM::log_normal_cdf (double) |
| double | StochHMM::pareto_cdf (double) |
| template<class T > | |
| T | StochHMM::min (std::vector< T > &set) |
| template<class T > | |
| T | StochHMM::max (std::vector< T > &set) |
| template<class T > | |
| T | StochHMM::construct_histogram (std::vector< T > &set, int N_bins) |
| template<class T > | |
| T | StochHMM::smooth_histogram (std::vector< T > &, int, int, int) |
| float | StochHMM::entropy (std::vector< float > &set) |
| Shannon's Entropy in log(2) space. | |
| float | StochHMM::rel_entropy (std::vector< float > &set, std::vector< float > &set2) |
| double | StochHMM::_integrate (double(*funct)(double, std::vector< double >), double upper, double lower, std::vector< double > param) |
| double | StochHMM::integrate (double(*funct)(double, std::vector< double >), double lower, double upper, std::vector< double > param, double max_error=0.001, double sum=0) |
| double | StochHMM::simpson (double(*funct)(double, std::vector< double >), double alpha, double beta, double lower, double upper) |
| double | StochHMM::adapt_simpson (double(*funct)(double, double, double), double alpha, double beta, double lower, double upper, double max_error, double sum) |
| double | StochHMM::gamma_func (double x) |
| double | StochHMM::gamma_pdf (double x, double alpha, double beta) |
| double | StochHMM::gamma_pdf (double x, std::vector< double > param) |
| double | StochHMM::gamma_cdf (double x, double alpha, double beta) |
| double | StochHMM::chi2_pdf (double x, double df) |
| double | StochHMM::chi2_cdf (double x, double df) |
| double | StochHMM::beta_pdf (double x, double a, double b) |
| double | StochHMM::beta_pdf (double x, std::vector< double > param) |
| double | StochHMM::beta_cdf (double x, double alpha, double beta) |
| double | StochHMM::expon_pdf (double x, double beta) |
| double | StochHMM::expon_cdf (double x, double beta) |
| double | StochHMM::normal_pdf (double x, double mu, double sigma) |
| float | StochHMM::bin_coef (int n, int k) |
| float | StochHMM::summation (float(*funct)(int, std::vector< float >), int lower, int upper, std::vector< float > param) |
| float | StochHMM::binomial_pdf (int k, int n, float p) |
| float | StochHMM::binomial_pdf (int k, std::vector< float > param) |
| float | StochHMM::binomial_cdf (int k, int n, float p) |
| double | StochHMM::multinomial_pdf (std::vector< int > r, int n, std::vector< double > p) |
| double | StochHMM::_low_igamma (double x, std::vector< double > param) |
| double | StochHMM::low_igamma (double x, double alpha) |
| double | StochHMM::upper_igamma (double x, double alpha) |
| double | StochHMM::erf (double x) |
| double | StochHMM::std_normal_cdf (double x) |
| #define PI 3.145926535897932 |
Definition at line 36 of file statistics.h.
1.8.1